Biolaitos September 2020

biolaitos@lists.oulu.fi

10 participants
27 discussions

Kaamos Symposium 2020 - Invitation to submit abstract
by Mukta Joshi 05 Nov '20

05 Nov '20

Dear colleagues, It is our pleasure to invite you to submit your abstract for Kaamos Symposium 2020. Due to current global situation, we will be organizing the conference online via Zoom this year. When: December 9 - 11, 2020 Where: Zoom This year’s our invited speakers are: * Prof. Tom Gilbert (University of Copenhagen) * Prof. Jochen Wolf (LMU Munich) * Prof. Alexandre Roulin (University of Lausanne) * Dr Clemens Küpper (Max Planck Institute for Ornithology) There will also be a workshop led by Dr Clemens Küpper and Dr Luke Eberhart-Phillips on “Open Access databases and large datasets” on the 11th December. You can find more information about the event on our website<https://www.oulu.fi/uniogs/node/206063>. If you wish to give a talk and/or present a poster, please, enter the details here<https://docs.google.com/spreadsheets/d/1C-8Db6PnIV9bQmCehUEdnM8eZ88hLCr6XgJ…> by the 1st November. Send your abstracts and/or posters to KaamosSymposium(a)gmail.com by the 10th November. The word limit for abstract submission is 300-400 words. We also require a short description for your poster, about 100 words, which you should submit together with your poster. Note that the talks will have to be pre-recorded and the instructions for recording the talk will be published on the website later. You will also be notified about the updates. As you are all aware, Ph.D. students get credits for attending and presenting a talk or a poster at the symposium and therefore students from all study levels are encouraged to attend! On behalf of Kaamos Symposium 2020 organizing committee, Mukta Joshi [cid:e70201b7-a43c-4370-af3f-ce2b6eec8212]

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Suomen Akatemian hakuaikaa jatkettu 5.10. klo 16.15 asti / , Due to errors in the online services, the September call deadline has been extended to 5 Oct at 16.15.
by Päivi Tomperi 30 Sep '20

30 Sep '20

Hei Akatemian hakuaikaa on jatkettu maanantaihin 5.10. asti (verkkoasioinnin häiriöistä johtuen). (https://www.aka.fi/) Due to errors in the online services, the September call deadline has been extended to 5 Oct at 16.15. Terveisin Päivi

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VL: TATU budjetointi 2021 LuTK Aikataulut /TATU-Project 2021 budgeting deadline is 2.10.2020.
by Jouni Aspi 30 Sep '20

30 Sep '20

Vielä muistus projektien ensi vuoden budjetoinnin aikataulusta. Eila Viinikainen meillä voi avustaa budjetoinnissa. Jouni Lähettäjä: Jari Karjalainen <Jari.Karjalainen(a)oulu.fi> Lähetetty: tiistai 1. syyskuuta 2020 16.25 Aihe: TATU budjetointi 2021 LuTK Aikataulut Hei, LuTK tutkimusryhmien johtajien on huolehdittava, että tutkimusyksikön projektien budjetointi vuodelle 2021 on tehty 2.10.2020 mennessä. Tuki projektitaloudelta. Sari Arolaakso: Avaruusfysiikka, Nanomo, NMR Spektroskopia. Birgit Jämsä: Maantiede, Matematiikka 7.9.2020- alkaen. Eila Viinikainen: Ekologia, Matematiikka 4.9.2020 asti. Henkilöillä, joilla työsuhde alkanut 31.5.2020 jälkeen eivät ole siirtyneet ja palkka- ja lomatietojen osalta Mepco uudistuksen takia TATUun. Niinpä toistaiseksi 31.5.2020 jälkeen tulleet uudet henkilöt pitäisi nostaa rekrynä TATUun. TATUssa on huoltokatko 18-20.9.2020, minkä jälkeen 21.9.2020 alkaen pitäisi myös 31.5.2020 jälkeen tulleet uudet henkilöt nousta TATUun tietovaraston kautta. Fysiikan Koulutusalan budjetointi 2021 30.9.2020 mennessä tuki allekirjoittaneelta. Tutkimusyksikköjen kustannuspaikkojen 2021 menot budjetoidaan TATUun 9.10.2020 mennessä Tuki allekirjoittaneelta. Olen sopinut LuTK tutkimusyksikköjohtajien kanssa budjetointiajan 5-9.10.2020 Budjettipalaverissa tutkimusyksikön johtajalla olisi hyvä olla mukana henkilöluettelo tai vaihtoehtoisesti henkilöluettelon voi lähettää minulle jo ennen budjettipalaveria. Henkilöluettelossa tulee olla kaikki tiedossa olevat tutkimusyksikön työntekijät vuodelle 2021: nimi; työsopimuksen kesto (mikäli ei ole 1-12/2021) ja kk-palkka. t. Jari Karjalainen Briefly in English Please, note following deadlines -TATU-Project 2021 budgeting deadline is 2.10.2020. Contact persons Sari Arolaakso: NANOMO, NMR Spec, SpaceAstro: Birgit Jämsä: Geography, Math Sci From 7.9.2020- Eila Viinikainen: EcoGen, Math Sci Until 4.9.2020. -TATU cost center 2021 budgeding deadline is 9.10.2020 Contact person Jari Karjalainen BR: Jari Karjalainen

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FW: MSc opportunity in Alaska and more!
by Maria Väisänen 29 Sep '20

29 Sep '20

Tiedoksi oheinen graduprojekti/ FYI the attached MSc opportunity Dear Herbivory Network friends, Hope you are all doing well. We wanted to share with you an MSc opportunity to work in Alaskan wetlands, a request for input to the Svalbard Science Conference, and introduce you to the Herbivory Variability Network! Please find more information below. Best wishes, Herbivory Network MS Assistantship available - Microbial ecology and carbon cycling of coastal Alaskan wetlands An NSF-funded MS assistantship at Utah State University is available starting in January or May of 2021 to work in the Beard Lab<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…> and closely with the Atwood Lab<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…> and the Waring Lab<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…>. We seek an enthusiastic and inquisitive student who is interested in understanding the role of herbivory, climate change, and wetland ecology and management in affecting microbial communities and carbon sequestration and greenhouse gas (carbon dioxide and methane) exchange in wetlands of the Yukon-Kuskokwim Delta. The project will focus on waterfowl impacts on vegetation and implications of atmospheric exchange. This study does not focus on waterfowl themselves but instead on the ecosystem services of coastal wetlands in Alaska. Utah State University is a highly selective, public, land-grant university and is classified as a Carnegie R1 Research University. The main campus is located in Logan, a community of 100,000 people. For more information on Logan see http://www.tourcachevalley.com<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…>. The Beard Lab is committed to supporting and advancing diversity in STEM. Applications from members of historically underrepresented groups are strongly encouraged. Required Qualifications: An undergraduate degree in ecology, soil microbiology, biological sciences, biogeochemistry or other closely related environmental science field with quantitative abilities and self-motivation. Required skills: Fieldwork experience in ecology. Preferred experience: Experience with R, DNA analysis, laboratory experience, and experience with LiCORs or other greenhouse gas analyzers. The successful applicant will spend two summers in a remote research camp on coastal western Alaska. Applicants should have experience or interest in learning how to drive boats and snowmobiles, and live in remote field sites for extended periods of time is needed. In your cover letter, please describe your experience or willingness to gain these experiences, and to live in a remote area. Review of applications will begin on October 10, 2020 and continue until the position is filled. The appointment will begin between January 1, 2021 and May 10, 2021, with an initial commitment of two years of funding. A competitive stipend (~$18,000) and full tuition package will be offered. In your application, please include: 1. A cover letter that explains how your research and experience aligns with the skills and research activities listed above 2. A CV or resume, including your GPA and relevant experience (GRE scores are optional) 3. A list of three professional references and their contact information. Please send your application and any questions to Karen Beard: karen.beard(a)usu.edu<mailto:karen.beard@usu.edu> ________________________________ Input to the third Svalbard Science Conference The third Svalbard Science Conference (SSC2021) will take place in Oslo in November 2021. As in previous years the goal of the conference is to enhance cooperation and quality within Svalbard research, build and strengthen interdisciplinary and international networks and consolidate Svalbard as an attractive platform for Arctic research. The Svalbard Science Forum and the Research Council for Norway have started the planning process and are asking institutions and stakeholder with research interests in Svalbard for input and suggestions. They invite you and your organization to give suggestions for the overall theme of the conference, topics for individual sessions, keynote speakers and members of the scientific committee. The candidates can be from your own or other institutions or a representative from a large international science project or organization. We kindly ask you to include a few lines about the person(s) background and how they would contribute to the conference as well as consider geographical, gender and age distribution. Input can be sent to: ssf(a)rcn.no<mailto:ssf@rcn.no?subject=Input%20to%20the%20third%20Svalbard%20Science%20Conference> ________________________________ The Herbivory Variability Network The Herbivory Variability Network (HerbVar) is a global research network, established in 2019 at Michigan State University, that aims to describe and understand how and why patterns in plant-herbivore interactions vary across the tree of life and around the world. HerbVar focuses on variability itself, and aims at understanding what leads some plant species to have high variability and others to have lower variability in their interactions with herbivores. Specifically, HerbVar has three initial research questions: * Is high variability (or skewness) a ubiquitous feature of plant-herbivore interactions? * What types of plants and ecosystems exhibit higher or lower variability? * What biotic and abiotic factors correlate with the distribution of herbivore damage? HerbVar is currently seeking collborators to collect data across the globe. You can find more information about HerbVar on their website (https://herbvar.org/index.html<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…>) or contacting Will Wetzel (wcwetzel(a)msu.edu<mailto:wcwetzel@msu.edu>) or Moria Robinson (robi1169(a)msu.edu<mailto:robi1169@msu.edu>). Copyright © 2020 Herbivory Network, All rights reserved. Want to change how you receive these emails? You can update your preferences<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…> or unsubscribe from this list<https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Flbhi.us19…>. [Email Marketing Powered by Mailchimp]<https://eur02.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.mailch…>

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Biology Thursday seminar 1st Oct: Tomer Czaczkes: Cognition and strategic information use in ants
by Heikki Helanterä 28 Sep '20

28 Sep '20

Dear colleagues, Biology Thursday seminar continues this week, 1st Oct, 12:15 via zoom (link at the bottom) with Dr. Tomer J. Czaczkes (Universität Regensburg) on "Cognition and strategic information use in ants" This is very exciting work at the intersection of animal behaviour, comparative psychology and economics, so don't miss it! See you online on Thursday! Heikki Cognition and strategic information use in ants https://www.animal-economics.com/tjczaczkes Animals have a bewildering array of different information sources available to them. This includes the abiotic world around them, their own memories, and information from other animals. How do animals choose what information to attend to, and which to ignore? Ants, for example, tend to ignore information from their sisters (pheromone trails) when they already know where to find food. But why? Is this a hard rule, or are they flexible in their choices? Unexpectedly, we found inspiration for our answer in Behavioural Economics. Ants may be ambiguity averse, and thus may be ignoring their sisters because pheromone trails are ambiguous about food quality. Given sufficient information, ants can make nuanced information use decisions. But how cognitively advanced are these decisions? We test whether ants can learn the relation concepts of "sameness" and "difference", and find that they can't. But many individuals do something perhaps more interesting: they develop personal heuristics for solving the challenges we gave them. Likewise, although ants have hard limits to cognition - they cannot learn to avoid pheromone trails - within their limits they develop effective heuristics in order to achieve good results. In all, we find that ants show surprising flexibility in information use, and when up against even the limits of their impressive flexibility, can develop effective heuristics to achieve good solutions. Heikki Helanterä is inviting you to a scheduled Zoom meeting. Topic: Biology Thursday seminar Time: This is a recurring meeting Meet anytime Join Zoom Meeting https://oulu.zoom.us/j/62917763539?pwd=WENZRy9Bb3NlSzlyeVlVamJ4RHR5Zz09 Meeting ID: 629 1776 3539 Passcode: 166151 One tap mobile +496938079883,,62917763539# Germany +496950502596,,62917763539# Germany Dial by your location +49 69 3807 9883 Germany +49 695 050 2596 Germany +49 69 7104 9922 Germany +49 30 5679 5800 Germany Meeting ID: 629 1776 3539 Find your local number: https://oulu.zoom.us/u/clPLBw2vz Join by SIP 62917763539(a)109.105.112.236 62917763539(a)109.105.112.235 Join by H.323 109.105.112.236 109.105.112.235 Meeting ID: 629 1776 3539 Passcode: 166151 =============================================== Heikki Helanterä Associate Professor (tenure track) Ekologian ja genetiikan tutkimusyksikkö / Ecology and Genetics Research Unit Oulun Yliopisto / University of Oulu / Finland heikki.helantera(a)oulu.fi<mailto:heikki.helantera@oulu.fi> +358-40-7507 334

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Teaching requirement for PhD students working on personal grants removed
by Lumi Viljakainen 27 Sep '20

27 Sep '20

Hei, The working group on renewal of teaching in Biology decided to remove the teaching requirement for PhD students working on personal grants: * The maximum number of contact teaching hours conforms to the recommendation made by the collective bargaining agreement: 394 hours for University Teachers and University Lecturers, 254 hours for University Researchers / Senior Research Fellows and 141 hours for Professors, also for those who have tenure track position. The University of Oulu has aligned that in maximum 10 hours of contact teaching is given per one credit (1 credit = 27 hours) and one contact teaching hour is 45 minutes. * All postdocs on salary participate in teaching in master's level courses (also bachelor's level if they want). We follow the Academy of Finland recommendation of teaching 5 % of the total working time, which is 80 hours/year. Supervising PhD, bachelor's and master's theses counts to the teaching hours. * All PhD students on salary participate in teaching either in the bachelor's or master's level courses, 50 hours/year. Supervising bachelor's and master's theses counts to the teaching hours. To ease up the "matchmaking" between the responsible teachers of courses and the postdocs & PhD students in our unit, I have compiled a table (https://docs.google.com/spreadsheets/d/1GtuvuMjv88-oXPSsnEFqL41ZMONGMEP4kOc…) that lists all the courses taught in the academic year 2020-2021 in our unit with their responsible teachers. I ask all the postdocs and PhD students to take a look on our curriculum (BSc: https://opas.peppi.oulu.fi/en/programme/12341, MSc: https://opas.peppi.oulu.fi/en/programme/14739) and then indicate in which courses you have already agreed or would be willing to teach and in which format (lectures/exercises). I encourage postdocs and PhD students to indicate if you would like to give lectures (experience in lecturing would be a great asset in your CV). Many thanks, Lumi Viljakainen Director of the Degree Programmes in Biology

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Siemens kahvia-automaatti kahvihuoneessa/ Siemens Fully Automatic Coffee Machine in the coffee room
by Jouni Aspi 26 Sep '20

26 Sep '20

Hei kaikki Kahvihuoneessamme on nyt Siemensin kahviautomaatti, jolla voi tehdä espressoa, espresso macchiatoa, tavallista kahvia, cappucinoa, latte macchiatoa ja lattea. Siinä voi käyttää kahvipapuja tai valmista kahvijauhetta. Laite on hyvin helppokäyttöinen ja vapaaehtoiset koehenkilöt ovat testanneet sen käyttöä (ks. liitteenä oleva kuva). Pikaohje ja tarkemmat ohjeet löytyvät koneen päältä. Ohjeet ovat myös liitetiedostossa useilla kielillä. Muistakaa tuoda oman makunne mukaiset kahvipavut tai -jauhe sekä maito jos sitä käytätte. Tällä hetkellä automaatissa ja vieressä olevassa pussissa on tuomiani Arvid Nordqvistin Espresso Nero -papuja (https://www.arvidnordquist.com/coffee/our-products/espresso-nero/). Muistakaa tyhjentää koneen sisältä välillä käytetty kahvi ja maitokahveja valmistettuanne puhdistaa maitojärjestelmä puhdistustoiminnolla. Dear all There is now in our coffee room a fully automatic Siemens coffee machine that can make espresso, espresso macchiato, regular coffee, cappucino, latte macchiato and latte. You may use coffee beans or grounded coffee. The device is very easy to use and has been tested by volunteers (see attached figure). Quick guide and more detailed instructions can be found on the top of the machine. Instructions are also attached in several languages. Remember to bring your own coffee beans or grounded coffee and milk if you use it. Currently, the coffee machine and the bag next to it contain the Arvid Nordqvist's Espresso Nero beans I have brought (https://www.arvidnordquist.com/coffee/our-products/espresso-nero/ ). Be sure to empty the used grounded coffee from time to time from inside the machine and clean the milk system with the cleaning function after making milk-coffees. Yours Jouni

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VL: Kysely: Kestävä kampusarki / Survey: Sustainability in everyday campus life
by Jouni Aspi 25 Sep '20

25 Sep '20

Lähettäjä: Minna-Mari Kemppainen <Minna-Mari.Kemppainen(a)oulu.fi> Lähetetty: perjantai 25. syyskuuta 2020 10.14 Aihe: Kysely: Kestävä kampusarki / Survey: Sustainability in everyday campus life Hei, pyynnöstä välitän teille alla olevan viestin. ystävällisin terveisin Minna [A picture containing graffiti Description automatically generated] Hei / Dear all, Jakaisitteko tätä eteenpäin verkostoissanne? Oulun yliopisto ja Oulun ammattikorkeakoulu laativat yhteisen kestävän kampusarjen toimenpideohjelman. Ohjelmaa toteutetaan 1.1.2021 alkaen. Ohjelman tavoitteiden laatimiseksi haluamme kuulla sinun mielipiteesi siitä, millaisena kampusarki mielestäsi näyttäytyy ja mihin toivoisit jatkossa tekojen ja toiminnan kohdistuvan. Kysely on laadittu Oulun yliopiston, Oulun ammattikorkeakoulun, OYY:n ja OSAKO:n yhteistyönä. Kysely löytyy osoitteesta https://link.webropolsurveys.com/s/kampusarki Kysely sisältää sekä avoimia että suljettuja kysymyksiä. Kysely jakaantuu neljään teemaan: lajittelu ja kierrätys, ruokailu, tavoitteet ja toiveet sekä liikkuminen. Kyselyssä käytetään yleistermiä kampus. Vastaa kampuskohtaisiin kysymyksiin siitä näkökulmasta, missä pääasiallisesti käyt töissä ja/tai opiskelet. Jos esimerkiksi työskentelet pääasiallisesti Linnanmaan kampuksella, vastaa kysymyksiin ajatellen Linnanmaan kampusta. Kyselyyn vastaaminen kestää 10-15 minuuttia. Kysely toteutetaan anonyymisti. Antamiasi vastauksia ei pystytä yhdistämään sinuun. English: Please share this information forward in your networks. University of Oulu and Oulu University of Applied Sciences compile a joint Sustainable Campus Action Plan. The plan will be in force from the beginning of year 2021. In order to formulate the objectives for the plan we want to hear your opinion on: (i) how the everyday and sustainable life appears in the campuses today and (ii) to which direction would you like sustainable actions to be directed in the future. The survey has been prepared in co-operation between the University of Oulu, Oulu University of Applied Sciences, OYY and OSAKO. The link to the survey is https://link.webropolsurveys.com/s/kampusarki The survey includes both open and multiple-choice questions. It is divided into four themes: waste sorting and recycling, dining/dining services, future aims and ambitions, and transportation. In the survey campus is used as a general term. Please reply to campus-based questions from the point of view of where you mainly work and/or study. For instance, if you mainly work at Linnanmaa campus, you respond to questions thinking about that campus. It takes approximately 10-15 minutes to reply to all the questions. Anonymity is guaranteed. Replies given can not be linked to any respondent.

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Yksikköpalaveri / Unit meeting
by Jouni Aspi 25 Sep '20

25 Sep '20

Jouni Aspi is inviting you to a scheduled Zoom meeting. Join Zoom Meeting https://oulu.zoom.us/j/67128241259 Meeting ID: 671 2824 1259 One tap mobile +358942451488,,67128241259# Finland +358972522471,,67128241259# Finland Dial by your location +358 9 4245 1488 Finland +358 9 7252 2471 Finland +358 3 4109 2129 Finland +1 408 652 8184 US (San Jose) +1 646 876 9923 US (New York) +1 669 900 6833 US (San Jose) +1 253 215 8782 US (Tacoma) +1 301 715 8592 US (Germantown) +1 312 626 6799 US (Chicago) +1 346 248 7799 US (Houston) +1 408 638 0968 US (San Jose) Meeting ID: 671 2824 1259 Find your local number: https://oulu.zoom.us/u/cznhezQQQ Join by SIP 67128241259(a)109.105.112.236 67128241259(a)109.105.112.235 Join by H.323 109.105.112.236 109.105.112.235 Meeting ID: 671 2824 1259

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reminder: Biology Thursday seminar today: Thomas Guillemaud from Peer Community In
by Heikki Helanterä 24 Sep '20

24 Sep '20

Dear colleagues, don't' forget: the Biology Thursday seminar starts today 12:15 via Zoom (link pasted at the end), we take a look at the peer reviewing and publication process rather than actual research, with Thomas Guillemaud from "Peer Community In": Peer Community In: A free recommendation process of unpublished scientific papers based on peer reviews Abstract: The Peer Community in (PCI, https://peercommunityin.org) project offers an alternative to the current system of publication - which is particularly expensive and not transparent. PCI is a non-profit scientific organization that aims to create specific communities of researchers reviewing and recommending, for free, unpublished preprints in their field (i.e. unpublished articles deposited on open online archives like arXiv.org and bioRxiv.org). Each PCI is a group of several hundred recommenders playing the role of editors who recommend such preprints based on peer-reviews to make them complete, reliable and citable articles, without the need for publication in 'traditional' journals (although the authors can submit their recommended preprints afterwards). Evaluations and recommendations by a PCI are free of charge. When a recommender decides to recommend a preprint, they write a recommendation text that is published along with all the editorial correspondence (reviews, recommender's decisions, authors' replies) by PCI. The preprint itself is not published by PCI: it remains in the preprint server where it has been posted by the authors. The first Peer Community in has been launched in 2017: Peer Community in Evolutionary Biology (PCI Evol Biol). More than 1000 recommenders have already joined PCI Evol Biol, PCI Paleontology, PCI Ecology, PCI Animal Science, PCI Zoology, PCI Mathematical and Computational Biology, PCI Archaeology, etc. We've won the 2020 LIBER award for library innovation of the European League of Research Libraries. The program is still under construction (and I'm happy to receive suggestions for speakers), but the most recent version is at: https://thursdayseminarbiology.wordpress.com/ See you at noon, Heikki Heikki Helanterä is inviting you to a scheduled Zoom meeting. Topic: Biology Thursday seminar Time: This is a recurring meeting Meet anytime Join Zoom Meeting https://oulu.zoom.us/j/62917763539?pwd=WENZRy9Bb3NlSzlyeVlVamJ4RHR5Zz09 Meeting ID: 629 1776 3539 Passcode: 166151 One tap mobile +358972522471,,62917763539# Finland +358341092129,,62917763539# Finland Dial by your location +358 9 7252 2471 Finland +358 3 4109 2129 Finland +358 9 4245 1488 Finland +1 408 652 8184 US (San Jose) +1 646 876 9923 US (New York) +1 669 900 6833 US (San Jose) +1 253 215 8782 US (Tacoma) +1 301 715 8592 US (Germantown) +1 312 626 6799 US (Chicago) +1 346 248 7799 US (Houston) +1 408 638 0968 US (San Jose) Meeting ID: 629 1776 3539 Find your local number: https://oulu.zoom.us/u/clPLBw2vz Join by SIP 62917763539(a)109.105.112.236<mailto:62917763539@109.105.112.236> 62917763539(a)109.105.112.235<mailto:62917763539@109.105.112.235> Join by H.323 109.105.112.236 109.105.112.235 Meeting ID: 629 1776 3539 Passcode: 166151 =============================================== Heikki Helanterä Associate Professor (tenure track) Ekologian ja genetiikan tutkimusyksikkö / Ecology and Genetics Research Unit Oulun Yliopisto / University of Oulu / Finland heikki.helantera(a)oulu.fi<mailto:heikki.helantera@oulu.fi> +358-40-7507 334

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Biolaitos September 2020