Crc March 2019

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Mykoplasmatesti
by Anja Heikkinen 18 Mar '19

18 Mar '19

Hei! Teen mykoplasmatestin viikolla 14. Näytteitä voi tuoda labraan 377B tiistaihin 2.4. klo 9 mennessä. T: Anja

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FW: Morning seminar event on Thursday, March 21, 8:30-9:15
by Katja Riipinen 18 Mar '19

18 Mar '19

From: Pirkko Huhtala Sent: maanantai 18. maaliskuuta 2019 8.56 To: bco(a)lists.oulu.fi; fbmm(a)lists.oulu.fi; LTK <ltk-staff(a)oulu.fi> Cc: Simo Kekäläinen <Simo-Pekka.Kekalainen(a)oulu.fi> Subject: Morning seminar event on Thursday, March 21, 8:30-9:15 Dear all, Welcome for a morning coffee, and meet other researchers on March 21 in Aapistie 5A, in Ravintolaraitti (the connecting restaurant area to Dentopolis). Professor Lloyd Ruddock will give a presentation 8:45-9:15 on "Folding towards a healthier tomorrow". Coffee is served from 8.30 onwards. Coffee and pulla is sponsored by R3 (Rapid Research Radicals) project. Let´s try this new format! Kind regards Pirkko Huhtala Pirkko Huhtala, Ph.D. Coordinator Biocenter Oulu University of Oulu Mailing address: P.O.Box 5000, FIN-90014 University of Oulu Finland Street address: 476B, Aapistie 5A, FIN-90220 Oulu Tel. sis/int. 486101, ulk./Ext. 0294 486101 Tel. +358-294 486101 e-mail pirkko.huhtala(a)oulu.fi<mailto:pirkko.huhtala@oulu.fi> www.oulu.fi/biocenter<http://www.oulu.fi/biocenter>

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FW: "Concepts in Biocatalysis" seminars during spring season...
by Katja Riipinen 18 Mar '19

18 Mar '19

From: Kristian Koski Sent: maanantai 18. maaliskuuta 2019 11.14 To: 'fbmm(a)lists.oulu.fi' <fbmm(a)lists.oulu.fi>; 'bco(a)lists.oulu.fi' <bco(a)lists.oulu.fi>; LTK <ltk-staff(a)oulu.fi>; LTK-idm <LTK-idm(a)oulu.fi> Cc: Riitta Keiski <riitta.keiski(a)oulu.fi>; Johanna Panula-Perälä <johanna.panula-perala(a)oulu.fi> Subject: RE: "Concepts in Biocatalysis" seminars during spring season... Dear all, This is a reminder that we have a Concepts in Biocatalysis lecture by Justus Reunanen this week Wednesday, March 20, at 10:00! The title for this presentation is "Phage display in search of novel enzymes, ligands, and enzyme inhibitors". See the details from the original messages below. Coffee and pulla is served before the talk! Best regards, Kristian From: Kristian Koski Sent: 22. helmikuuta 2019 11:48 To: fbmm(a)lists.oulu.fi<mailto:fbmm@lists.oulu.fi>; bco(a)lists.oulu.fi<mailto:bco@lists.oulu.fi>; 'ltk-staff(a)oulu.fi' <ltk-staff(a)oulu.fi<mailto:ltk-staff@oulu.fi>>; 'LTK-idm(a)oulu.fi' <LTK-idm(a)oulu.fi<mailto:LTK-idm@oulu.fi>> Cc: Riitta Keiski <riitta.keiski(a)oulu.fi<mailto:riitta.keiski@oulu.fi>>; Johanna Panula-Perälä <johanna.panula-perala(a)oulu.fi<mailto:johanna.panula-perala@oulu.fi>> Subject: "Concepts in Biocatalysis" seminars during spring season... Dear all, We will continue our lecture series "Concepts in Biocatalysis" with two lectures during this spring season. The first lecture will be given by a Docent Justus Reunanen on Wednesday March 20 at 10 am in the Faculty of Biochemistry and Molecular Medicine (Aapistie 7A, Kontinkangas) in the lecture hall L101B. The second lecture is on Wednesday April 24 at 1 pm in the lecture room L101A and will be given by André Juffer. All the people working in the biochemistry, biotechnology or medical field, academic and non-academic, are warmly welcome to these seminars, so mark these days in your calendars! I will also organize coffee/tea and pulla for these events! :) Justus Reunanen, Academy research fellow and a group leader in Biocenter Oulu, comes from the Cancer and Translational Medicine Research Unit, University of Oulu, and the title of his talk is "Phage display in search of novel enzymes, ligands, and enzyme inhibitors". Dr. André Juffer is a group leader and a Biocomputing coordinator in Biocenter Oulu, and keeps his office in the Faculty of Biochemistry and Molecular Medicine, University of Oulu. The title of this talk is "Proton transfer in coarse grained molecular dynamics". We initiated the seminar series during an ERDF StrucBioCat project (2012-2014; http://www.oulu.fi/biocenter/strucbiocat). These lectures have been given by scientists, either from academia or from biotech companies. The coming and the past lectures can be found under the following link: https://www.oulu.fi/biocenter/protein-crystallography/events. The aim of these lectures is to become better informed about recent developments in the biocatalysis research field and to get more collaboration between the biotech companies and the university researchers. We are further improving our infrastructure with help of a new ERDF project "New technological solutions to enhance Biocenter Oulu services" -AutoBioCat (2018-2020) (https://www.oulu.fi/biocenter/erdf/autobiocat, contact person Outi Lampela). The improved infrastructure increases method development options and is a response to growing sample numbers. This infrastructure shall be introduced during 2019. This is also a great opportunity for biotech companies to see our facilities at FBMM. We will be happy to provide a guided tour to show our updated research infrastructure. Please forward this E-mail to persons that might be interested but are not in this list. Please inform me, if you would like to have private discussion with Justus or André. This would be possible before or after their lectures. With Best Regards, Kristian Kristian Koski, Ph.D. Biocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, Aapistie 7A, 90220 Oulu. Tel: 0294 48 1174

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FW: Life Long Health Day - Northern Finland Birth Cohorts event
by Katja Riipinen 18 Mar '19

18 Mar '19

From: Teija Juola Sent: maanantai 18. maaliskuuta 2019 10.34 To: bco(a)lists.oulu.fi; fbmm(a)lists.oulu.fi; LTK <ltk-staff(a)oulu.fi> Subject: RE: Life Long Health Day - Northern Finland Birth Cohorts event Dear all, Please, find an updated programme of the Northern Finland Birth Cohorts day from below. You are very welcome to join the event! Best Regards, Teija Juola __________________________ Teija Juola Project Researcher Center for Life Course Health Research Medical faculty University of Oulu Finland Tel. +358 50 4666 137 [cid:image001.png@01D4DD76.12F19A50]<http://www.oulu.fi/university/> Northern Finland Birth Cohorts – more than 50 years of research Coming next: #bornin85or86 TellUs Innovation Arena, University of Oulu – March 20th 2019 From the year 1965 onwards the researchers at the University of Oulu and the Oulu University Hospital have engaged with the parents and their children to study the determinants of life-long health. On the 20th of March 2019 – International day of Happiness – we will launch our next engagement with the participants of the Northern Finland Birth Cohort 1986 with an open event from the TellUs Innovation Arena (University of Oulu, Linnanmaa, Erkki Koiso-Kanttilan katu 1, door 2T). Welcome! PROGRAMME 20th March 2019 When What Where 9.00 – 15.30 Meet Cohort Center employees and try out tests performed in the Northern Finland Birth Cohort data collection TellUs Innovation Arena · InBody measure · Hand grip strength · Cognitive test TellUs Aspire 9.00 – 9.15 Welcome and Launch of NFBC video (in Finnish and English) Marjo-Riitta Järvelin & Minna Ruddock TellUs Stage 9.15 – 10.30 Round-table discussion (in Finnish) Subject: The role of population and register studies in public health Chair: Marjo-Riitta Järvelin Participants: Anne Remes, Maritta Perälä-Heape, Heini Hakosalo, Eero Kajantie, Sirkka Keinänen-Kiukaanniemi, Raija Korpelainen, Minna Ruddock TellUs Stage 11.00 – 12.00 Brown Bag lunch seminar (in English) Subject: Happiness Speakers: Mirka Hintsanen, Faculty of Education & Sylvain Sebert, Faculty of Medicine TellUs Stage 12.30 – 12.45 Publishing of the Northern Finland Birth Cohorts Historic (in Finnish and English) Maarit Jokela, Minna Ruddock, Tuula Ylitalo TellUs Stage 13.00 – 14.30 Posters and discussion (in Finnish and English) Studies on population and register data Participants are researchers from different research fields TellUs Stage 15.30 End of event Live stream: https://connect.funet.fi/tellus

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Reminder: Kontinkangas Campus Seminar Series on Tue March 19 - Speaker Dr. Yoshitaka Fujihara: Analysis of mouse models of male infertility using genetic modification
by Mirja Peltola 18 Mar '19

18 Mar '19

Reminder Kontinkangas Campus Seminar Series<https://www.oulu.fi/uniogs/dp/hbsdp/guest-seminars> Dear all, Tomorrow on 19thof March 14:00-15:00 in Leena Palotie auditorium (101A) Dr. Yoshitaka Fujihara from Osaka (Japan) will give a lecture with a title: Analysis of mouse models of male infertility using genetic modification Short introduction: Dr. Yoshitaka Fujihara is head of the Laboratory of Developmental Biotechnology at the Department of Bioscience and Genetics at the National Cerebral and Cardiovascular Center in Osaka. http://orcid.org/0000-0001-8332-3507 Dr. Y. Fujihara has got his PhD in while working with Prof. Masaru Okabe's lab at RIMD, Osaka University. He has used X-linked EGFP transgenic mice to identify X-linked genes Rhox5/Pem and Fthl17. After receiving a PhD degree in 2010, he has created over 30 gene-KO animals in three years and identified many genes essential for fertility such as SPESP1, SPACA1, and PMIS2. Dr. Fujihara has made an observation that in many cases infertility phenotypes were due to ADAM3 abrogation. Then studding GPI-anchored proteins he has found that TEX101 interacts with ADAM3 and regulates the sperm migrating ability into the oviduct. Highlighted publications: https://www.ncbi.nlm.nih.gov/pubmed/30209135 https://www.ncbi.nlm.nih.gov/pubmed/27357688 https://www.ncbi.nlm.nih.gov/pubmed/23633567 Coffee and pulla service before the seminar in front of the Leena Palotie auditorium! PhD Students' credits: Attendance to 10 seminars -> 0,5 ECTS Welcome! Best wishes, Mirja ------------------------------------------------------------------------------------------------------ Mirja Peltola Koordinaattori | Coordinator Oulun yliopisto | University of Oulu Terveys- ja biotieteiden tohtoriohjelma | Health and Biosciences Doctoral Programme Tel. 0294 48 5447 PO Box 5000, FI-90014 OULUN YLIOPISTO (Aapistie 5A, Room 474B) www.oulu.fi<http://www.oulu.fi/yliopisto> [cid:image001.jpg@01D4DD78.600C9B80]

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Kontinkangas Campus Seminar Series on Tue March 19 - Speaker Dr. Yoshitaka Fujihara: Analysis of mouse models of male infertility using genetic modification
by Mirja Peltola 15 Mar '19

15 Mar '19

Kontinkangas Campus Seminar Series<https://www.oulu.fi/uniogs/dp/hbsdp/guest-seminars> Dear all, On 19thof March 14:00-15:00 in Leena Palotie auditorium (101A) Dr. Yoshitaka Fujihara from Osaka (Japan) will give a lecture with a title: Analysis of mouse models of male infertility using genetic modification Short introduction: Dr. Yoshitaka Fujihara is head of the Laboratory of Developmental Biotechnology at the Department of Bioscience and Genetics at the National Cerebral and Cardiovascular Center in Osaka. http://orcid.org/0000-0001-8332-3507 Dr. Y. Fujihara has got his PhD in while working with Prof. Masaru Okabe's lab at RIMD, Osaka University. He has used X-linked EGFP transgenic mice to identify X-linked genes Rhox5/Pem and Fthl17. After receiving a PhD degree in 2010, he has created over 30 gene-KO animals in three years and identified many genes essential for fertility such as SPESP1, SPACA1, and PMIS2. Dr. Fujihara has made an observation that in many cases infertility phenotypes were due to ADAM3 abrogation. Then studding GPI-anchored proteins he has found that TEX101 interacts with ADAM3 and regulates the sperm migrating ability into the oviduct. Highlighted publications: https://www.ncbi.nlm.nih.gov/pubmed/30209135 https://www.ncbi.nlm.nih.gov/pubmed/27357688 https://www.ncbi.nlm.nih.gov/pubmed/23633567 Coffee and pulla service before the seminar in front of the Leena Palotie auditorium! PhD Students' credits: Attendance to 10 seminars -> 0,5 ECTS Welcome! Best wishes, Mirja ------------------------------------------------------------------------------------------------------ Mirja Peltola Koordinaattori | Coordinator Oulun yliopisto | University of Oulu Terveys- ja biotieteiden tohtoriohjelma | Health and Biosciences Doctoral Programme Tel. 0294 48 5447 PO Box 5000, FI-90014 OULUN YLIOPISTO (Aapistie 5A, Room 474B) www.oulu.fi<http://www.oulu.fi/yliopisto> [cid:image003.jpg@01D4DB2D.73705560]

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FW: BCO day 2019- Call for Miniposters
by Antti Haapalainen 14 Mar '19

14 Mar '19

From: bco-bounces(a)lists.oulu.fi<mailto:bco-bounces@lists.oulu.fi> <bco-bounces(a)lists.oulu.fi<mailto:bco-bounces@lists.oulu.fi>> On Behalf Of Sonia Sarfraz Sent: 13. maaliskuuta 2019 15:25 To: hbsdp(a)lists.oulu.fi<mailto:hbsdp@lists.oulu.fi>; fbmm(a)lists.oulu.fi<mailto:fbmm@lists.oulu.fi>; bco(a)lists.oulu.fi<mailto:bco@lists.oulu.fi> Subject: [Bco] BCO day 2019- Call for Miniposters Dear all, The Biocenter Oulu Day 2019<https://www.oulu.fi/uniogs/dp/hbsdp/bcoday2019> " Nature meets technology - the many faces of modern medicine" will be held on Tuesday, April 9, 2019 at 8.30-16.00 in Leena Palotie Auditorium 101A, Aapistie 5A. We are now collecting mini-posters for the BCO Day bulletin. We kindly invite all the researchers to send the mini-posters in the format as instructed in the attached template (the template is also downloadable from this link >><https://www.oulu.fi/sites/default/files/content/Miniposter%20template%20201…>). The deadline for submitting is 28th of March 2019. All submission can be send to Sonia.Sarfraz(a)oulu.fi<mailto:Sonia.Sarfraz@oulu.fi>. Best regards on the behalf of Biocenter Oulu Day 2019 organizing committee.

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FW: Life Long Health Day - Northern Finland Birth Cohorts event
by Katja Riipinen 13 Mar '19

13 Mar '19

From: Pirkko Huhtala Sent: keskiviikko 13. maaliskuuta 2019 15.26 To: bco(a)lists.oulu.fi; fbmm(a)lists.oulu.fi; LTK <ltk-staff(a)oulu.fi> Subject: VL: Life Long Health Day - Northern Finland Birth Cohorts event Dear all, note this great whole day event in Linnanmaa on March 20! Kind regards Pirkko Huhtala Pirkko Huhtala, Ph.D. Coordinator Biocenter Oulu University of Oulu Mailing address: P.O.Box 5000, FIN-90014 University of Oulu Finland Street address: 476B, Aapistie 5A, FIN-90220 Oulu Tel. sis/int. 486101, ulk./Ext. 0294 486101 Tel. +358-294 486101 e-mail pirkko.huhtala(a)oulu.fi<mailto:pirkko.huhtala@oulu.fi> www.oulu.fi/biocenter<http://www.oulu.fi/biocenter> Aihe: Life Long Health Day - Northern Finland Birth Cohorts event Northern Finland Birth Cohorts – More Than 50 Years of Research Coming next: #bornin85or86 TellUs Innovation Arena, University of Oulu – 20.03.2019 From the year 1965 onwards the researchers at the University of Oulu and the Oulu University Hospital have engaged with the parents and their children to study the environmental and molecular determinants of life-long health. On the 20th of March 2019 – International day of Happiness – we will officially launch our next engagement with the participants of the Northern Finland Birth Cohort 1986 from the TellUs Innovation Arena Stage (University of Oulu, Linnanmaa, Pentti Kaiteran katu 1). Welcome! PROGRAMME When What Where 9.00 – 15.30 Meet Cohort Center employees and try out tests performed in the Northern Finland Birth Cohort data collection TellUs Innovation Arena · InBody measurement (free) · Hand grip strength · Cognitive test TellUs Aspire 9.00 – 9.15 Welcome and Launch of Northern Finland Birth Cohort NFBC video Minna Ruddock & Marjo-Riitta Järvelin TellUs Stage 9.15 – 10.30 Round-table discussion (in Finnish) Subject: The role of population and register studies in public health Chair: Marjo-Riitta Järvelin Participants: Anne Remes, Maritta Perälä-Heape, Minna Ruddock TellUs Stage 11.00 – 12.00 Brown Bag lunch seminar Subject: Happiness Speakers: Mirka Hintsanen, Faculty of Humanities & Sylvain Sebert, Faculty of Medicine TellUs Stage 12.30 – 12.45 Publishing of the Northern Finland Birth Cohorts Historic Maarit Jokela, Minna Ruddock, Tuula Ylitalo TellUs Stage 13.00 – 14.30 Posters and discussion Studies on population and register data Participants are researchers from different fields TellUs Stage 15.30 End of event [cid:image001.png@01D4D9B1.B1AADA30][cid:image002.png@01D4D9B1.B1AADA30] [IDOH 5B92E5 TransBG.png]

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Re: [Crc] Fluoresenssimikroskoopin kamera / camera for the fluorescence microscope
by Antti Haapalainen 13 Mar '19

13 Mar '19

Hei, Fluoresenssimikroskoopin kamera ja ohjelmisto on vaihdettu, ja mikroskooppi on kokonaisuudessaan valmis käytettäväksi. Tässä muutama asia: 1. Mikroskoopin kuvia varten on perustettu uusi verkkolevy (ltk-yhteiset\Yhteiset\CRC ZEISS). Verkkolevy on kooltaan 10 gigaa. Koska mikroskoopin tietokone on verkossa, kuvia voi tallentaa myös muuallekin (kotihakemisto, ryhmänkansio). 2. Seuraavilla henkilöillä on pääsy ko verkkolevylle: Antti Haapalainen, Ravindra Daddali, Henna Karvonen, Nina Kokkonen, Antti Nätynki, Laura Kytövuori, Anniina Hiltunen ja Ilkka Pietilä. Jos haluat pääsyn CRC ZEISS verkkolevylle, ilmoita siitä minulle viimeistään huomenna 14.3. Nimiä voi lisäillä myös myöhemminkin. 3. Alkukoulutuksessa olivat mukana Nina Kokkonen, Ilkka Pietilä ja Henna Karvonen. Heiltä voi näin aluksi kysyä neuvoa. 4. Ari Filander voi tulla 26.3. antamaan lisäkoulutusta mikroskoopin ohjelmaan liittyen. Eli ilmoittakaa minulle, jos haluatte Arin paikan päälle käyttäjäkoulutusta varten. Hi, The camera and software for the fluorescence microscope have been replaced, and the microscope is ready for use. Here are a few things to know: 1. For the microscope images, a new network disk (ltk-yhteiset\Yhteiset\CRC ZEISS) is available. The network disk is 10 giga in size. Because the microscope computer is on the network, images can also be saved elsewhere (home directory, group folder). 2. The following persons currently have access to the network disk: Antti Haapalainen, Ravindra Daddali, Henna Karvonen, Nina Kokkonen, Antti Nätynki, Laura Kytövuori, Anniina Hiltunen and Ilkka Pietilä. If you would like to access the CRC ZEISS network disk, please let me know latest by Thursday tomorrow. The names can be, however, added later. 3. The Initial training included Nina Kokkonen, Ilkka Pietilä and Henna Karvonen. They can be asked for advice/help for now. 4. Ari Filander can come 26.3. to provide further training in the microscope software. So, please let me know if you want Ari to come back for training. From: Antti Haapalainen Sent: 25. helmikuuta 2019 10:18 To: 'crc(a)lists.oulu.fi' <crc(a)lists.oulu.fi> Subject: Fluoresenssimikroskoopin kamera / camera for the fluorescence microscope Hei, Uusi kamera ja ohjelmisto fluoresenssimikroskoopille tullaan asentamaan 14.3. Hi, New camera and software for fluorescence microscope will be installed on 14.3.

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AoF programmes - additional info
by Emma Pirilä 13 Mar '19

13 Mar '19

Dear researchers, based on some questions I got relating to the Academy programmes call, here is some additional info: 1. The programme memorandum for the "Molecular Regulatory mechanisms of Life" focuses a lot on the genome. After discussing with the AoF, it was clarified that the programme involves all kinds of regulatory networks and mechanisms of life. Not just the ones related to the genome. 2. The Molecular regulatory mechanisms of life-programme includes two calls with different applicant profiles: In the call directed to novel projects, the applicant is a consortium whereas in the call directed to ongoing AoF projects, the applicant is the PI of the project (not a consortium). Please don't hesitate to ask if you have any questions. Best regards, Emma ************************ Emma Pirilä, PhD Research Funding Specialist Faculty of Medicine Faculty of Biochemistry and Molecular Medicine Biocenter Oulu Aapistie 5A, 2nd floor FIN- 90230 University of Oulu Finland Phone: +358503426428 e-mail: emma.pirila(a)oulu.fi<mailto:emma.pirila@oulu.fi> ************************

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Crc March 2019